The Aivia workstation includes multiple image analysis software packages, notably Aivia v16 and cellpose-SAM.

Location:

  • JSCBB C350 or remotely

Software packages include:

  • Aivia
  • FIJI/ImageJ with Trackmate-Cellpose
  • Python in VS Code with cellpose-SAM GUI

Documents:

  • 260707_convertVSI - how to export VS200 .vsi files as .tif or how to import .vsi files into Aivia

Links:

Computer Specifications
Aivia Training
Aivia Wiki
Aivia Youtube
FIJI/ImageJ Trackmate-Cellpose plug-in
Cellpose-SAM in Python